T cells altered by CRISPR may be safe to use in cancer patients

Schematic representation of CRISPR-Cas9 NYCE T cells. (Source: Stadtmauer et al., 2020)

Schematic representation of CRISPR-Cas9 NYCE T cells. (Source: Stadtmauer et al., 2020)

Schematic representation of CRISPR-Cas9 NYCE T cells. (Source: Stadtmauer et al., 2020)

Discovery of CRISPR (clustered regularly interspaced short palindromic re- peats) in E.coli in 1987, and the subsequent development of CRISPR-Cas9 -(CRISPR associated with Cas9 endonuclease- in 2012 (in “parallel” by Gasiunas et al., 2012 & Jinek et al., 2012) has sparked interest in the utility of gene-editing as immunotherapy. [Read more about CRISPR Timeline and listen to Freakonomics Podcast of Jennifer Doudna]. Advances in CRISPR-Cas 9 technology has enabled modification of immune cells to improve cancer immunotherapy. Where cancer-patients’ own cells are genetically engineered at single cell levels to target cancer-immunogens, resulting in direct killing of cancer cells. However, this can be challenging as “engineered cells” in the case of T cells can become exhausted and dysfunctional, resulting in unwanted and potentially detrimental effects.

Scientists from USA have recently reported on the first human phase I clinical trial that tested the safety of using CRISPR edited immune cells in patients with advanced cancer. CRISPR-Cas9 gene editing was used to enhance the natural ability of human T cells to fight cancer in three patients. Two genes encoding the endogenous T cell receptor (TCR) chains, TCRα (TRAC) and TCRβ (TRBC) were deleted in T cells to reduce TCR mispairing and to enhance the expression of a synthetic, cancer-specific TCR transgene (NY-ESO-1). Removal of a third gene encoding PD-1 (PDCD1), was performed to improve anti-tumor immunity by limiting T cell exhaustion.

Bloodwork from the patients showed the CRISPR-edited T cells circulated in the body for at least nine months. The editing did have some “off-target” effects, in which the wrong DNA was unintentionally edited. However the number of cells with unintended changes were minimal and these cells were short-lived.

Overall the clinical trial was a success, showing CRISPR gene-editing is safe and can be used at clinical scale for cancer immunotherapy. A follow-up study on a larger cohort and longer follow-up will be needed to determine safety before scaling up the trial to determine potential efficacy.

Journal Article: Stadtmauer et al., 2020. CRISPR-engineered T cells in patients with refractory cancer. Science 

Article by Bonamy Holtak